Report/Guide

Adeogun, M; Bunch, J; Dexter, A; Dondi, C; Murta, T; Nikula, C; Shaw, M; Taylor, A; Partarrieu, I; Romanchikova, M; Smith, N; Thomas, S; Venton, J (2021) Metrology for Digital Pathology. Digital pathology cross-theme project report. NPL Report. AS 102

Brochu, F; Cooke, E; Romanchikova, M; Bunch, J; Dexter, A; Steven, R; Thomas, S; Shaw, M; Pilling, J; Ling, S; Strittmatter, N; Wang, Y; Race, A; Fraser, D; Francis, J; Newman, C; Chavda, V; Wood, C; Lavelle, J (2020) Federation of Imaging Data for Life sciences: current status of metadata collection for high content screening, mass spectrometry imaging and light sheet microscopy of AstraZeneca, GlaxoSmithKline and NPL. NPL Report. MS 24

Cooke, E; Hayes, M; Romanchikova, M; Dexter, A; Steven, R; Thomas, S; Shaw, M; Pilling, J; Ling, S; Strittmatter, N; Ivanov, D; Wang, Y; Race, A; Fraser, D; Francis, J; Newman, C; West, A; Lavelle, J (2020) Acquisition and management of high content screening, light-sheet microscopy and mass spectrometry imaging data at AstraZeneca, GlaxoSmithKline and NPL: a survey report. NPL Report. MS 25

Article

Foylan, S; Schniete, J K; Kolln, L S; Dempster, J; Hansen, C G; Shaw, M; Bushell, T J; McConnell, G (2024) Mesoscale standing wave imaging. Journal of Microscopy, 295 (1). pp. 33-41. (In Press)

Taylor, P A; Miles, E; Hoffmann, L; Kelly, S M; Kry, S F; Moller, D S; Palmans, H; Akbarov, K; Aznar, M C; Clemantel, E; Corning, C; Effeney, R; Healy, B; Moore, A; Nakamura, M; Petel, S; Shaw, M; Stock, M; Lehmann, J; Clark, C H (2023) Prioritizing clinical trial quality assurance for photons and protons: A failure modes and effects analysis (FMEA) comparison. Radiotherapy and Oncology, 182. 109494

Al-Rekabi, Z; Dondi, C; Faruqui, N; Siddiqui, N S; Elowsson, L; Rissler, J; Karedal, M; Mudway, I; Larsson-Callerfelt, A-K; Shaw, M (2023) Uncovering the cytotoxic effects of air pollution with multimodal imaging of in vitro respiratory models. Royal Society Open Science, 10 (4). 221426

Foylan, S; Amos, W B; Dempster, J; Kolln, L; Hansen, C G; Shaw, M; McConnell, G (2023) MesoTIRF: a prism based Total Internal Reflection Fluorescence illuminator for high resolution, high contrast imaging of large cell populations. Applied Physics Letters, 122 (11). 113701

Romanchikova, M; Thomas, S A; Dexter, A; Shaw, M; Partarrieu, I; Smith, N; Venton, J; Adeogun, M; Brettle, D; Turpin, R J (2022) Need for measurement science in digital pathology. Journal of Pathology Informatics, 13. 100157

Hunter, P; Payne-Dwyer, A L; Shaw, M; Signoret, N; Leake, M C (2022) Single-molecule and super-resolved imaging deciphers membrane behaviour of onco-immunogenic CCR5. iScience, 25 (12). 105675

Lehmann, J; Hussein, M; Barry, M A; Siva, S; Moore, A; Chu, M; Diez, P; Eaton, D J; Harwood, J; Lonski, P; Claridge Mackonis, E; Meehan, C; Patel, R; Ray, X; Shaw, M; Shepherd, J; Smyth, G; Standen, T S; Subramanian, B; Clark, C H (2022) SEAFARER – A new concept for validating radiotherapy patient specific QA for clinical trials and clinical practice. Radiotherapy and Oncology, 171. pp. 121-128.

Manescu, P; Shaw, M; Neary-Zajiczek, L; Bendkowski, C; Claveau, R; Elmi, M; Brown, B J; Fernando-Reyes, D (2022) Content aware multi-focus image fusion for high-magnification blood film microscopy. Biomedical Optics Express, 13 (2). pp. 1005-1016.

Nelson, G; Boehm, U; Bagley, S; Bajcsy, P; Bischof, J; Brown, C M; Dauphin, A; Dobbie, I M; Eriksson, J E; Faklaris, O; Fernandez-Rodriguez, J; Ferrand, A; Gelman, L; Gheisari, A; Hartmann, H; Kukat, C; Laude, A; Mitkovski, M; Munck, S; North, A J; Rasse, T M; Resch-Genger, U; Schuetz, L C; Seitz, A; Strambio-De-Castillia, C; Swedlow, J R; Alexopoulos, I; Aumayr, K; Avilov, S; Bakker, G J; Bammann, R R; Bassi, A; Beckert, H; Beer, S; Belyaev, Y; Bierwagen, J; Birngruber, K A; Bosch, M; Breitlow, J; Cameron, L A; Chalfoun, J; Chambers, J J; Chen, C E L; Conde-Sousa, E; Corbett, A D; Cordelieres, F P; Del Nery, E; Dietzel, R; Eismann, F; Fazeli, E; Felscher, A; Fried, H; Gaudreault, N; Goh, W I; Guibert, T; Hedleigh, R; Hemmerich, P; Holst, G A; Itano, M S; Jaffe, C B; Jambor, H K; Jarvis, S C; Keppler, A; Kirchenbuechler, D; Kirchner, M; Kobayashi, N; Krens, G; Kunis, S; Lacoste, J; Marcello, M; Martins, G G; Metcalf, D J; Mitchell, C A; Moore, J; Mueller, T; Nelson, M S; Ogg, S; Onami, S; Palmer, A L; Paul-Gilloteaux, P; Pimental, J A; Plantard, L; Podder, S; Rexhepaj, E; Royon, A; Saari, M A; Schapman, D; Schoonderwoert, V; Schroth-Diez, B; Schwartz, S; Shaw, M; Spitaler, M; Stoeckl, M T; Sudar, D; Teillon, J; Terjung, S; Thuenauer, R; Wilms, C D; Wright, G D; Nitschke, R (2021) QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy. Journal of Microscopy, 284 (1). pp. 56-73.

Shaw, M; Claveau, R; Manescu, P; Elmi, M; Brown, B J; Scrimgeour, R; Kolln, L S; McConnell, G; Fernandez-Reyes, D (2021) Optical mesoscopy, machine learning, and computational microscopy enable high information content diagnostic imaging of blood films. Journal of Pathology, 255 (1). pp. 62-71.

Russell, C T; Shaw, M (2021) mmSIM: an open toolbox for accessible structured illumination microscopy. Philosophical Transactions of the Royal Society A, 379 (2199). 20200353

Claveau, R; Manescu, P; Fernandez-Reyes, D; Shaw, M (2020) Structure-dependent amplification for denoising and background correction in Fourier ptychographic microscopy. Optics Express, 28 (24). 35438 ISSN 1094-4087

Kepiro, I E; Marzuoli, I; Hammond, K; Ba, X L; Lewis, H; Shaw, M; Gunnoo, S B; de Santis, E; Łapińska, U; Pagliara, S; Holmes, M A; Lorenz, C D; Hoogenboom, B W; Fraternali, F; Ryadnov, M G (2020) Engineering Chirally Blind Protein Pseudocapsids into Antibacterial Persisters. ACS Nano, 14 (2). pp. 1609-1622. ISSN 1936-0851

Claveau, R; Manescu, P; Elmi, M; Pawar, V; Shaw, M; Fernandez-Reyes, D (2020) Digital refocusing and extended depth of field reconstruction in Fourier ptychographic microscopy. Biomedical Optics Express, 11 (1). pp. 215-226. ISSN 2156-7085

Neary-Zajiczek, L; Essmann, C; Clancy, N; Haider, A; Miranda, E; Shaw, M; Gander, A; Davidson, B; Fernandez-Reyes, D; Pawar, V; Stoyanov, D (2019) Whole-Sample Mapping of Cancerous and Benign Tissue Properties. Lecture Notes in Computer Science, 11764. pp. 760-768. ISSN 0302-9743

Busatto, N; Stolojan, V; Shaw, M; Keddie, J L; Roth, P J (2019) Reactive Polymorphic Nanoparticles: Preparation via Polymerization-Induced Self-Assembly and Postsynthesis Thiol-para -Fluoro Core Modification. Macromolecular Rapid Communications, 40 (2). 1800346 ISSN 10221336

Longatti, A; Schindler, C; Collinson, A; Jenkinson, L; Matthews, C; Fitzpatrick, L; Blundy, M; Minter, R; Vaughan, T; Shaw, M; Tigue, N (2018) High affinity single-chain variable fragments are specific and versatile targeting motifs for extracellular vesicles. Nanoscale, 10 (29). pp. 14230-14244. ISSN 2040-3364

Corbett, A D; Shaw, M; Yacoot, A; Jefferson, A; Schermelleh, L; Wilson, T; Booth, M; Salter, P S (2018) Microscope calibration using laser written fluorescence. Optics Express, 26 (17). pp. 21887-21899. ISSN 1094-4087

Shaw, M; Bella, A; Ryadnov, M G (2017) CREIM: coffee ring effect imaging model for monitoring protein self-assembly in situ. Journal of Physical Chemistry Letters, 8 (19). pp. 4846-4851.

Elmi, M; Pawar, V M; Shaw, M; Wong, D; Zhan, H Y; Srinivasan, M A (2017) Determining the biomechanical of touch sensation in C. elegans. Scientific Reports, 7. 12329

Essman, C L*; Elmi, M*; Shaw, M; Anand, G M*; Pawar, V M*; Srinivasan, M A* (2017) In-vivo high resolution AFM topographic imaging of Caenorhabditis elegans reveals previously unreported surface structures of cuticle mutants. Nanomed. - Nanotechol. Biol. Med., 13 (1). pp. 183-189.

Zajiczek, L; Shaw, M; Faruqui, N; Bella, A; Pawar, V M*; Srinivasan, M A*; Ryadnov, M G (2016) Nano-mechanical single-cell sensing of cell-matrix contacts. Nanoscale, 8 (42). pp. 18105-18112.

Westmoreland, D*; Shaw, M; Grimes, W*; Metcalf, D J*; Burden, J J*; Gomez, K*; Knight, A E; Cutler, D F* (2016) Super-resolution microscopy as a potential approach to diagnosis of platelet granule disorders. Journal of Thrombosis and Haemostasis, 14 (4). pp. 839-849.

O'Halleran, K; Shaw, M (2014) Optimized approaches for optical sectioning and resolution enhancement in 2D structured illumination microscopy. Biomed. Opt. Express, 5 (8). pp. 2580-2590.

Martin, E M; Shaw, A; Faruqui, N; Shaw, M (2013) Accurate quantification and delivery of thermal dose to cells in culture. J. Acoust. Soc. Am., 134 (5). p. 4182.

Martin, E M; Shaw, A; Faruqui, N; Shaw, M (2013) Accurate quantification and delivery of thermal dose to cells in culture. J. Acoust. Soc. Am., 134 (5). p. 4182.

Shaw, M; O'Holleran, K; Paterson, C* (2013) Investigation of the confocal wavefront sensor and its application to biological microscopy. Opt. Express, 21 (16). pp. 19353-19362.

Shaw, M; Faruqui, N; Gurdak, E; Tomlins, P (2013) Three-dimensional cell morphometry for the quantification of cell-surface interactions. Tissue Eng. Part C - Methods, 19 (1). pp. 48-56.

Bella, A; Ray, S; Shaw, M; Ryadnov, M G (2012) Arbitrary self-assembly of peptide extracellular microscopic matrices. Angew. Chem. Int. Ed., 51 (2). pp. 428-431.

Pollard, A J; Faruqui, N; Shaw, M; Clifford, C A; Takahashi, Y*; Korchev, Y E*; Ebejer, N*; Macpherson, J V*; Unwin, P R*; Roy, D (2011) Development of a novel combined scanning electrochemical microscope (SECM) and scanning ion-conductance microscope (SICM) probe for soft sample imaging.. MRS Conference Proceedings, 1422. mrsf11-1422-qq07-04

Shaw, M; Hall, S; Knox, S; Stevens, R; Paterson, C* (2010) Characterization of deformable mirrors for spherical aberration correction in optical sectioning microscopy. Opt. Express, 18 (7). pp. 6900-6913.